- Add architecture, CI/CD, CLI reference documentation
- Update installation, operations, and quick-start guides
- Add Jupyter workflow and queue documentation
- New landing page and research runner plan
- Move ci-test.sh and setup.sh to scripts/
- Trim docs/src/zig-cli.md to current structure
- Replace hardcoded secrets with placeholders in configs
- Update .gitignore to block .env*, secrets/, keys, build artifacts
- Slim README.md to reflect current CLI/TUI split
- Add cleanup trap to ci-test.sh
- Ensure no secrets are committed
- Add jupyter.zig command with start/stop/status actions
- Update main.zig to include jupyter command in CLI
- CLI now handles all Jupyter setup transparently
- Data scientists only need: ml jupyter start
- Auto-detects container runtime (Podman/Docker)
- Manages container lifecycle automatically
- Provides clear status and error messages
- Add jupyter_launcher.sh script to start Jupyter with ML tools
- Create cli_integration.py helper for CLI operations
- Add sample notebook structure for experiments
- Create workflow documentation for seamless data science integration
- Remove redundant requirements file
- Test and verify Jupyter notebook 7.5.0 works
- ML tools container successfully built with all tools
- All 6 ML tools (MLflow, WandB, Streamlit, Dash, Panel, Bokeh) working
- Remove 14 duplicate README files from test fixtures
- Clean up and restructure docs/src/testing.md with comprehensive testing guide
- Update main README.md to highlight testing and reference docs/ structure
- Remove empty .new files
- Keep only valuable, directory-specific README files (reduced from 34 to 20)
- Update deployment.md to reference new deployments/ directory structure
- Update CLI reference with new multi-user authentication system
- Add roles and permissions examples to configuration
- Fix docker-compose paths in testing documentation
- Remove references to non-existent docker-compose.test.yml
- Update troubleshooting with correct test commands
- Remove misplaced README files from test directories
- Move docker-compose.prod.yml and docker-compose.homelab-secure.yml to deployments/
- Create deployments/README.md with usage instructions
- Update test scripts to use new deployment paths
- Fix performance regression detection to output to tests/bin/
- All test outputs now properly organized in tests/bin/
- Move compiled test binaries to tests/binaries/
- Move profiling output files to tests/binaries/
- Add README.md for test binaries documentation
- Project root now clean of test artifacts
- Fix CLI WebSocket port (9101 vs 9103) in both status and authenticateUser
- Add researcher_user and analyst_user to server config with proper permissions
- Fix API key hashes for all users (complete 64-char SHA256)
- Enable IP whitelist with localhost and private network ranges
- Fix memory leaks in WebSocket handshake (proper key cleanup)
- Fix binary character display in server responses
- All authentication tests now pass: admin, researcher, analyst
Status: Multi-user authentication fully functional
- Add 10ms delay after successful WebSocket handshake
- Use std.posix.nanosleep for proper timing
- This should prevent 'client sent data before handshake complete' error
- CLI WebSocket implementation improved but needs server testing
Status: WebSocket handshake timing improved, ready for testing
- Add Redis configuration to local config
- Fix API key format (api_keys vs apikeys)
- Update CLI to use port 9101
- Disable IP whitelist for testing
- Server now connects to Redis and authenticates
- WebSocket connection reaches server but handshake fails
- CLI needs WebSocket protocol implementation fix
Status: Server running, auth working, WebSocket handshake needs debugging
