Since app is not released, removed old commands entirely:
- Deleted exec.zig (533 lines) - modularized version
- Deleted queue.zig (1248 lines) - complete removal
- Unified all functionality into run.zig
New unified 'ml run' command features:
- Auto-detects local vs remote execution via mode.detect()
- Supports --local and --remote flags to force execution mode
- Includes all resource options: --cpu, --memory, --gpu
- Research context: --hypothesis, --context, --intent, --tags
- Validation modes: --dry-run, --validate, --explain
- Uses modular exec/remote.zig and exec/local.zig for execution
Dispatcher updates (main.zig):
- Removed 'e' (exec) handler
- Removed 'q' (queue) handler
- Updated help text to show unified command
Import cleanup (commands.zig):
- Removed queue.zig import
Total code reduction: ~1,700 lines
All tests pass.
Add comprehensive research context tracking to jobs:
- Narrative fields: hypothesis, context, intent, expected_outcome
- Experiment groups and tags for organization
- Run comparison (compare command) for diff analysis
- Run search (find command) with criteria filtering
- Run export (export command) for data portability
- Outcome setting (outcome command) for experiment validation
Update queue and requeue commands to support narrative fields.
Add narrative validation to manifest validator.
Add WebSocket handlers for compare, find, export, and outcome operations.
Includes E2E tests for phase 2 features.
