chore(tools): update scripts, native libs, and documentation

Update tooling and documentation:
- Smoke test script with scheduler health checks
- Release cleanup script
- Native test scripts with Redis integration
- TUI SSH test script
- Performance regression detector with scheduler metrics
- Profiler with distributed tracing
- Native CMake with test targets
- Dataset hash tests
- Storage symlink resistance tests
- Configuration reference documentation updates
This commit is contained in:
Jeremie Fraeys 2026-02-26 12:08:58 -05:00
parent d87c556afa
commit dddc2913e1
No known key found for this signature in database
12 changed files with 771 additions and 354 deletions

View file

@ -10,34 +10,70 @@ This document provides a comprehensive reference for all configuration options i
**File:** `configs/api/dev.yaml`
```yaml
base_path: "./data/dev/experiments"
data_dir: "./data/dev/active"
auth:
enabled: true
api_keys:
dev_user:
hash: "CHANGE_ME_SHA256_DEV_USER_KEY"
admin: true
roles: ["admin"]
permissions:
"*": true
enabled: false
server:
address: ":9101"
address: "0.0.0.0:9101"
tls:
enabled: false
cert_file: "/app/ssl/cert.pem"
key_file: "/app/ssl/key.pem"
security:
production_mode: false
allowed_origins:
- "http://localhost:3000"
api_key_rotation_days: 90
audit_logging:
enabled: true
log_path: "./data/dev/logs/fetchml-audit.log"
rate_limit:
enabled: false
ip_whitelist:
- "127.0.0.1"
- "::1"
- "localhost"
requests_per_minute: 60
burst_size: 10
ip_whitelist: []
monitoring:
prometheus:
enabled: true
port: 9101
path: "/metrics"
health_checks:
enabled: true
interval: "30s"
redis:
addr: "redis:6379"
password: ""
db: 0
database:
type: "sqlite"
connection: "./data/dev/fetchml.sqlite"
logging:
level: "info"
file: "./data/dev/logs/fetchml.log"
audit_log: "./data/dev/logs/fetchml-audit.log"
resources:
max_workers: 1
desired_rps_per_worker: 2
podman_cpus: "2"
podman_memory: "4Gi"
```
### Multi-User Setup
**File:** `configs/api/multi-user.yaml`
```yaml
base_path: "/app/data/experiments"
data_dir: "/data/active"
auth:
enabled: true
api_keys:
@ -46,39 +82,87 @@ auth:
admin: true
roles: ["user", "admin"]
permissions:
read: true
write: true
delete: true
"*": true
researcher1:
hash: "CHANGE_ME_SHA256_RESEARCHER1_KEY"
admin: false
roles: ["user", "researcher"]
permissions:
jobs:read: true
jobs:create: true
jobs:update: true
jobs:delete: false
"jobs:read": true
"jobs:create": true
"jobs:update": true
"jobs:delete": false
analyst1:
hash: "CHANGE_ME_SHA256_ANALYST1_KEY"
admin: false
roles: ["user", "analyst"]
permissions:
jobs:read: true
jobs:create: false
jobs:update: false
jobs:delete: false
"jobs:read": true
"jobs:create": false
"jobs:update": false
"jobs:delete": false
server:
address: ":9101"
tls:
enabled: false
security:
production_mode: false
allowed_origins: []
rate_limit:
enabled: true
requests_per_minute: 60
burst_size: 20
ip_whitelist: []
monitoring:
prometheus:
enabled: true
port: 9101
path: "/metrics"
health_checks:
enabled: true
interval: "30s"
redis:
url: "redis://redis:6379"
password: ""
db: 0
database:
type: "sqlite"
connection: "/app/data/experiments/fetch_ml.sqlite"
logging:
level: "info"
file: "/logs/app.log"
audit_log: ""
resources:
max_workers: 3
desired_rps_per_worker: 3
podman_cpus: "2"
podman_memory: "4Gi"
```
### Production
**File:** `configs/api/prod.yaml`
```yaml
base_path: "/app/data/prod/experiments"
data_dir: "/app/data/prod/active"
auth:
enabled: true
api_keys:
# Production users configured here
admin:
hash: "replace-with-sha256-of-your-api-key"
admin: true
roles:
- admin
permissions:
"*": true
server:
address: ":9101"
@ -88,29 +172,270 @@ server:
key_file: "/app/ssl/key.pem"
security:
production_mode: false
allowed_origins: []
rate_limit:
enabled: true
requests_per_minute: 30
ip_whitelist:
- "127.0.0.1"
- "::1"
- "192.168.0.0/16"
- "10.0.0.0/8"
requests_per_minute: 60
burst_size: 10
ip_whitelist: []
monitoring:
prometheus:
enabled: true
port: 9101
path: "/metrics"
health_checks:
enabled: true
interval: "30s"
redis:
addr: "redis:6379"
password: ""
db: 0
database:
type: "sqlite"
connection: "/app/data/prod/fetch_ml.sqlite"
logging:
level: "info"
file: "/app/logs/app.log"
audit_log: "/app/logs/audit.log"
file: "/app/data/prod/logs/fetch_ml.log"
audit_log: "/app/data/prod/logs/audit.log"
resources:
max_workers: 2
desired_rps_per_worker: 5
podman_cpus: "2"
podman_memory: "4Gi"
```
### Homelab Secure
**File:** `configs/api/homelab-secure.yaml`
Secure configuration for homelab deployments with production-grade security settings:
```yaml
base_path: "/data/experiments"
data_dir: "/data/active"
auth:
enabled: true
api_keys:
homelab_admin:
hash: "CHANGE_ME_SHA256_HOMELAB_ADMIN_KEY"
admin: true
roles:
- admin
permissions:
"*": true
homelab_user:
hash: "CHANGE_ME_SHA256_HOMELAB_USER_KEY"
admin: false
roles:
- researcher
permissions:
experiments: true
datasets: true
jupyter: true
server:
address: ":9101"
tls:
enabled: false
cert_file: "/app/ssl/cert.pem"
key_file: "/app/ssl/key.pem"
security:
production_mode: true
allowed_origins:
- "https://ml-experiments.example.com"
rate_limit:
enabled: true
requests_per_minute: 60
burst_size: 10
ip_whitelist:
- "127.0.0.1"
- "192.168.0.0/16"
monitoring:
prometheus:
enabled: true
port: 9101
path: "/metrics"
health_checks:
enabled: true
interval: "30s"
redis:
url: "redis://:CHANGE_ME_REDIS_PASSWORD@redis:6379"
password: ""
db: 0
database:
type: "sqlite"
connection: "/data/experiments/fetch_ml.sqlite"
logging:
level: "info"
file: "/logs/fetch_ml.log"
audit_log: ""
resources:
max_workers: 1
desired_rps_per_worker: 2
podman_cpus: "2"
podman_memory: "4Gi"
```
## Worker Configurations
### Production Worker
### Local Development Worker
**File:** `configs/workers/dev-local.yaml`
```yaml
worker_id: "local-worker"
base_path: "data/dev/experiments"
train_script: "train.py"
redis_url: "redis://localhost:6379/0"
local_mode: true
prewarm_enabled: false
max_workers: 2
poll_interval_seconds: 2
auto_fetch_data: false
data_manager_path: "./data_manager"
dataset_cache_ttl: "30m"
data_dir: "data/dev/active"
snapshot_store:
enabled: false
podman_image: "python:3.9-slim"
container_workspace: "/workspace"
container_results: "/results"
gpu_devices: []
gpu_vendor: "apple"
gpu_visible_devices: []
# Apple M-series GPU configuration
apple_gpu:
enabled: true
metal_device: "/dev/metal"
mps_runtime: "/dev/mps"
resources:
max_workers: 2
desired_rps_per_worker: 2
podman_cpus: "2"
podman_memory: "4Gi"
metrics:
enabled: false
queue:
type: "native"
native:
data_dir: "data/dev/queue"
task_lease_duration: "30m"
heartbeat_interval: "1m"
max_retries: 3
graceful_timeout: "5m"
```
### Homelab Secure Worker
**File:** `configs/workers/homelab-secure.yaml`
Secure worker configuration with snapshot store and Redis authentication:
```yaml
worker_id: "homelab-worker"
base_path: "/tmp/fetchml-jobs"
train_script: "train.py"
redis_url: "redis://:${REDIS_PASSWORD}@redis:6379/0"
local_mode: true
max_workers: 1
poll_interval_seconds: 2
auto_fetch_data: false
data_manager_path: "./data_manager"
dataset_cache_ttl: "30m"
data_dir: "/data/active"
snapshot_store:
enabled: true
endpoint: "minio:9000"
secure: false
bucket: "fetchml-snapshots"
prefix: "snapshots"
timeout: "5m"
max_retries: 3
podman_image: "python:3.9-slim"
container_workspace: "/workspace"
container_results: "/results"
gpu_devices: []
resources:
max_workers: 1
desired_rps_per_worker: 2
podman_cpus: "2"
podman_memory: "4Gi"
metrics:
enabled: true
listen_addr: ":9100"
metrics_flush_interval: "500ms"
task_lease_duration: "30m"
heartbeat_interval: "1m"
max_retries: 3
graceful_timeout: "5m"
```
### Docker Development Worker
**File:** `configs/workers/docker.yaml`
```yaml
worker_id: "docker-worker"
base_path: "/tmp/fetchml-jobs"
train_script: "train.py"
redis_addr: "redis:6379"
redis_password: ""
redis_db: 0
local_mode: true
max_workers: 1
poll_interval_seconds: 5
podman_image: "python:3.9-slim"
container_workspace: "/workspace"
container_results: "/results"
gpu_devices: []
gpu_vendor: "none"
gpu_visible_devices: []
metrics:
enabled: true
listen_addr: ":9100"
metrics_flush_interval: "500ms"
```
### Legacy TOML Worker (Deprecated)
**File:** `configs/workers/worker-prod.toml`
```toml
@ -146,48 +471,57 @@ enabled = true
listen_addr = ":9100"
```
```toml
# Production Worker (NVIDIA, UUID-based GPU selection)
worker_id = "worker-prod-01"
base_path = "/data/ml-experiments"
## Security Hardening
podman_image = "ml-training:latest"
gpu_vendor = "nvidia"
gpu_visible_device_ids = ["GPU-REPLACE_WITH_REAL_UUID"]
gpu_devices = ["/dev/dri"]
container_workspace = "/workspace"
container_results = "/results"
train_script = "train.py"
### Seccomp Profiles
FetchML includes a hardened seccomp profile for container sandboxing at `configs/seccomp/default-hardened.json`.
**Features:**
- **Default-deny policy**: `SCMP_ACT_ERRNO` blocks all syscalls by default
- **Allowlist approach**: Only explicitly permitted syscalls are allowed
- **Multi-architecture support**: x86_64, x86, aarch64
- **Blocked dangerous syscalls**: ptrace, mount, umount2, reboot, kexec_load, open_by_handle_at, perf_event_open
**Usage with Docker/Podman:**
```bash
# Docker with seccomp
docker run --security-opt seccomp=configs/seccomp/default-hardened.json \
-v /data:/data:ro \
my-image:latest
# Podman with seccomp
podman run --security-opt seccomp=configs/seccomp/default-hardened.json \
--read-only \
--no-new-privileges \
my-image:latest
```
### Docker Worker
**File:** `configs/workers/docker.yaml`
**Key Allowed Syscalls:**
- File operations: `open`, `openat`, `read`, `write`, `close`
- Memory: `mmap`, `munmap`, `mprotect`, `brk`
- Process: `clone`, `fork`, `execve`, `exit`, `wait4`
- Network: `socket`, `bind`, `listen`, `accept`, `connect`, `sendto`, `recvfrom`
- Signals: `rt_sigaction`, `rt_sigprocmask`, `kill`, `tkill`
- Time: `clock_gettime`, `gettimeofday`, `nanosleep`
- I/O: `epoll_create`, `epoll_ctl`, `epoll_wait`, `poll`, `select`
```yaml
worker_id: "docker-worker"
base_path: "/tmp/fetchml-jobs"
train_script: "train.py"
**Customization:**
redis_addr: "redis:6379"
redis_password: ""
redis_db: 0
Copy the default profile and modify for your needs:
local_mode: true
```bash
cp configs/seccomp/default-hardened.json configs/seccomp/custom-profile.json
# Edit to add/remove syscalls
```
max_workers: 1
poll_interval_seconds: 5
**Testing Seccomp:**
podman_image: "python:3.9-slim"
container_workspace: "/workspace"
container_results: "/results"
gpu_devices: []
gpu_vendor: "none"
gpu_visible_devices: []
metrics:
enabled: true
listen_addr: ":9100"
metrics_flush_interval: "500ms"
```bash
# Test with a simple container
docker run --rm --security-opt seccomp=configs/seccomp/default-hardened.json \
alpine:latest echo "Seccomp test passed"
```
## CLI Configuration
@ -274,15 +608,70 @@ api_key = "<analyst-api-key>"
| Option | Type | Default | Description |
|--------|------|---------|-------------|
| `security.production_mode` | bool | false | Enable production hardening |
| `security.allowed_origins` | array | [] | Allowed CORS origins |
| `security.api_key_rotation_days` | int | 90 | Days until API key rotation required |
| `security.audit_logging.enabled` | bool | false | Enable audit logging |
| `security.audit_logging.log_path` | string | - | Audit log file path |
| `security.rate_limit.enabled` | bool | true | Enable rate limiting |
| `security.rate_limit.requests_per_minute` | int | 60 | Rate limit |
| `security.ip_whitelist` | array | [] | Allowed IP addresses |
| `security.rate_limit.requests_per_minute` | int | 60 | Requests per minute limit |
| `security.rate_limit.burst_size` | int | 10 | Burst request allowance |
| `security.ip_whitelist` | array | [] | Allowed IP addresses/CIDR ranges |
| `security.failed_login_lockout.enabled` | bool | false | Enable login lockout |
| `security.failed_login_lockout.max_attempts` | int | 5 | Max failed attempts before lockout |
| `security.failed_login_lockout.lockout_duration` | string | "15m" | Lockout duration (e.g., "15m") |
### Monitoring
| Option | Type | Default | Description |
|--------|------|---------|-------------|
| `monitoring.prometheus.enabled` | bool | true | Enable Prometheus metrics |
| `monitoring.prometheus.port` | int | 9101 | Prometheus metrics port |
| `monitoring.prometheus.path` | string | "/metrics" | Metrics endpoint path |
| `monitoring.health_checks.enabled` | bool | true | Enable health checks |
| `monitoring.health_checks.interval` | string | "30s" | Health check interval |
### Database
| Option | Type | Default | Description |
|--------|------|---------|-------------|
| `database.type` | string | "sqlite" | Database type (sqlite, postgres, mysql) |
| `database.connection` | string | - | Connection string or path |
| `database.host` | string | - | Database host (for postgres/mysql) |
| `database.port` | int | - | Database port (for postgres/mysql) |
| `database.username` | string | - | Database username |
| `database.password` | string | - | Database password |
| `database.database` | string | - | Database name |
### Queue
| Option | Type | Default | Description |
|--------|------|---------|-------------|
| `queue.type` | string | "native" | Queue backend type (native, redis, sqlite, filesystem) |
| `queue.native.data_dir` | string | - | Data directory for native queue |
| `queue.sqlite_path` | string | - | SQLite database path for queue |
| `queue.filesystem_path` | string | - | Filesystem queue path |
| `queue.fallback_to_filesystem` | bool | false | Fallback to filesystem on Redis failure |
### Resources
| Option | Type | Default | Description |
|--------|------|---------|-------------|
| `resources.max_workers` | int | 1 | Maximum concurrent workers |
| `resources.desired_rps_per_worker` | int | 2 | Desired requests per second per worker |
| `resources.requests_per_sec` | int | - | Global request rate limit |
| `resources.request_burst` | int | - | Request burst allowance |
| `resources.podman_cpus` | string | "2" | CPU limit for Podman containers |
| `resources.podman_memory` | string | "4Gi" | Memory limit for Podman containers |
### Redis
| Option | Type | Default | Description |
|--------|------|---------|-------------|
| `redis.url` | string | "redis://localhost:6379" | Redis connection URL |
| `redis.addr` | string | - | Redis host:port shorthand |
| `redis.password` | string | - | Redis password |
| `redis.db` | int | 0 | Redis database number |
| `redis.max_connections` | int | 10 | Max Redis connections |
### Logging

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@ -9,6 +9,9 @@ set(COMMON_SOURCES
add_library(fetchml_common STATIC ${COMMON_SOURCES})
# Required for linking into shared libraries on Alpine Linux
set_property(TARGET fetchml_common PROPERTY POSITION_INDEPENDENT_CODE ON)
target_include_directories(fetchml_common PUBLIC
${CMAKE_CURRENT_SOURCE_DIR}/include
)

View file

@ -248,8 +248,8 @@ int test_performance() {
auto create_time = duration_cast<milliseconds>(create_end - start);
auto hash_time = duration_cast<milliseconds>(hash_end - create_end);
printf(" Created %d files in %lld ms\n", num_files, create_time.count());
printf(" Hashed %d files in %lld ms\n", num_files, hash_time.count());
printf(" Created %d files in %ld ms\n", num_files, create_time.count());
printf(" Hashed %d files in %ld ms\n", num_files, hash_time.count());
printf(" Throughput: %.1f files/sec\n", num_files * 1000.0 / hash_time.count());
fh_free_string(hash);

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@ -8,79 +8,71 @@
#include <limits.h>
#include <fcntl.h>
#include <errno.h>
#include <filesystem>
#include "../native/queue_index/storage/index_storage.h"
// Get absolute path of current working directory
static std::string get_cwd() {
char buf[PATH_MAX];
if (getcwd(buf, sizeof(buf)) != nullptr) {
return std::string(buf);
}
return "";
}
namespace fs = std::filesystem;
// Test: Verify O_EXCL prevents symlink attacks on .tmp file (CVE-2024-45339)
static int test_symlink_attack_prevention() {
printf(" Testing symlink attack prevention (CVE-2024-45339)...\n");
std::string cwd = get_cwd();
char base_dir[4096];
snprintf(base_dir, sizeof(base_dir), "%s/test_symlink_XXXXXX", cwd.c_str());
if (mkdtemp(base_dir) == nullptr) {
// Create temp directory using mkdtemp for security
char base_dir_template[] = "/tmp/test_symlink_XXXXXX";
char* base_dir_ptr = mkdtemp(base_dir_template);
if (base_dir_ptr == nullptr) {
printf(" ERROR: mkdtemp failed\n");
return -1;
}
fs::path base_dir(base_dir_ptr);
// Create a fake index.bin file
char index_path[4096];
snprintf(index_path, sizeof(index_path), "%s/index.bin", base_dir);
// Create paths using std::filesystem
fs::path index_path = base_dir / "index.bin";
fs::path decoy_path = base_dir / "decoy.txt";
fs::path tmp_path = base_dir / "index.bin.tmp";
// Create a decoy file that a symlink attack would try to overwrite
char decoy_path[4096];
snprintf(decoy_path, sizeof(decoy_path), "%s/decoy.txt", base_dir);
FILE* f = fopen(decoy_path, "w");
FILE* f = fopen(decoy_path.c_str(), "w");
if (!f) {
printf(" ERROR: failed to create decoy file\n");
rmdir(base_dir);
rmdir(base_dir.c_str());
return -1;
}
fprintf(f, "sensitive data that should not be overwritten\n");
fclose(f);
// Create a symlink at index.bin.tmp pointing to the decoy
char tmp_path[4096];
snprintf(tmp_path, sizeof(tmp_path), "%s/index.bin.tmp", base_dir);
if (symlink(decoy_path, tmp_path) != 0) {
if (symlink(decoy_path.c_str(), tmp_path.c_str()) != 0) {
printf(" ERROR: failed to create symlink\n");
unlink(decoy_path);
rmdir(base_dir);
unlink(decoy_path.c_str());
rmdir(base_dir.c_str());
return -1;
}
// Now try to initialize storage - it should fail or not follow the symlink
IndexStorage storage;
if (!storage_init(&storage, base_dir)) {
if (!storage_init(&storage, base_dir.c_str())) {
printf(" ERROR: storage_init failed\n");
unlink(tmp_path);
unlink(decoy_path);
rmdir(base_dir);
unlink(tmp_path.c_str());
unlink(decoy_path.c_str());
rmdir(base_dir.c_str());
return -1;
}
// Try to open storage - this will attempt to write to .tmp file
// With O_EXCL, it should fail because the symlink exists
bool open_result = storage_open(&storage);
(void)open_result; // Suppress unused warning - we're testing side effects
// Clean up
storage_cleanup(&storage);
unlink(tmp_path);
unlink(decoy_path);
unlink(index_path);
rmdir(base_dir);
unlink(tmp_path.c_str());
unlink(decoy_path.c_str());
unlink(index_path.c_str());
rmdir(base_dir.c_str());
// Verify the decoy file was NOT overwritten (symlink attack failed)
FILE* check = fopen(decoy_path, "r");
FILE* check = fopen(decoy_path.c_str(), "r");
if (check) {
char buf[256];
if (fgets(buf, sizeof(buf), check) != nullptr) {
@ -103,22 +95,24 @@ static int test_symlink_attack_prevention() {
static int test_stale_temp_file_handling() {
printf(" Testing stale temp file handling...\n");
std::string cwd = get_cwd();
char base_dir[4096];
snprintf(base_dir, sizeof(base_dir), "%s/test_stale_XXXXXX", cwd.c_str());
if (mkdtemp(base_dir) == nullptr) {
// Create temp directory using mkdtemp
char base_dir_template[] = "/tmp/test_stale_XXXXXX";
char* base_dir_ptr = mkdtemp(base_dir_template);
if (base_dir_ptr == nullptr) {
printf(" ERROR: mkdtemp failed\n");
return -1;
}
fs::path base_dir(base_dir_ptr);
// Create paths using std::filesystem
fs::path tmp_path = base_dir / "index.bin.tmp";
fs::path index_path = base_dir / "index.bin";
// Create a stale temp file
char tmp_path[4096];
snprintf(tmp_path, sizeof(tmp_path), "%s/index.bin.tmp", base_dir);
FILE* f = fopen(tmp_path, "w");
FILE* f = fopen(tmp_path.c_str(), "w");
if (!f) {
printf(" ERROR: failed to create stale temp file\n");
rmdir(base_dir);
rmdir(base_dir.c_str());
return -1;
}
fprintf(f, "stale data\n");
@ -126,18 +120,18 @@ static int test_stale_temp_file_handling() {
// Initialize and open storage - should remove stale file and succeed
IndexStorage storage;
if (!storage_init(&storage, base_dir)) {
if (!storage_init(&storage, base_dir.c_str())) {
printf(" ERROR: storage_init failed\n");
unlink(tmp_path);
rmdir(base_dir);
unlink(tmp_path.c_str());
rmdir(base_dir.c_str());
return -1;
}
if (!storage_open(&storage)) {
printf(" ERROR: storage_open failed to handle stale temp file\n");
unlink(tmp_path);
unlink(tmp_path.c_str());
storage_cleanup(&storage);
rmdir(base_dir);
rmdir(base_dir.c_str());
return -1;
}
@ -152,17 +146,15 @@ static int test_stale_temp_file_handling() {
if (!storage_write_entries(&storage, entries, 1)) {
printf(" ERROR: storage_write_entries failed\n");
storage_cleanup(&storage);
rmdir(base_dir);
rmdir(base_dir.c_str());
return -1;
}
// Clean up
storage_cleanup(&storage);
char index_path[4096];
snprintf(index_path, sizeof(index_path), "%s/index.bin", base_dir);
unlink(index_path);
unlink(tmp_path);
rmdir(base_dir);
unlink(index_path.c_str());
unlink(tmp_path.c_str());
rmdir(base_dir.c_str());
printf(" Stale temp file handling: PASSED\n");
return 0;

165
scripts/check-audit-sink.sh Normal file
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@ -0,0 +1,165 @@
#!/bin/bash
# Pre-deployment audit sink gate script
# Verifies the write-once audit sink is reachable and writable
set -e
# Colors for output
RED='\033[0;31m'
GREEN='\033[0;32m'
YELLOW='\033[1;33m'
NC='\033[0m' # No Color
# Default values
ENV="staging"
TIMEOUT=10
AUDIT_SINK_HOST=""
AUDIT_SINK_PORT=""
# Parse arguments
while [[ $# -gt 0 ]]; do
case $1 in
--env)
ENV="$2"
shift 2
;;
--timeout)
TIMEOUT="$2"
shift 2
;;
--host)
AUDIT_SINK_HOST="$2"
shift 2
;;
--port)
AUDIT_SINK_PORT="$2"
shift 2
;;
--help)
echo "Usage: $0 [OPTIONS]"
echo ""
echo "Options:"
echo " --env ENV Environment (staging|prod) [default: staging]"
echo " --timeout SECONDS Timeout in seconds [default: 10]"
echo " --host HOST Audit sink host (auto-detected if not set)"
echo " --port PORT Audit sink port (auto-detected if not set)"
echo " --help Show this help message"
exit 0
;;
*)
echo "Unknown option: $1"
exit 1
;;
esac
done
# Auto-detect audit sink based on environment
if [ -z "$AUDIT_SINK_HOST" ]; then
case $ENV in
staging)
AUDIT_SINK_HOST="ml-staging-audit-sink"
AUDIT_SINK_PORT="6379"
;;
prod)
AUDIT_SINK_HOST="ml-prod-audit-sink"
AUDIT_SINK_PORT="6379"
;;
*)
echo -e "${RED}Error: Unknown environment '$ENV'${NC}"
exit 1
;;
esac
fi
echo "Checking audit sink for environment: $ENV"
echo "Host: $AUDIT_SINK_HOST"
echo "Port: $AUDIT_SINK_PORT"
echo "Timeout: ${TIMEOUT}s"
# Check if we can reach the audit sink
echo ""
echo "Step 1: Checking network reachability..."
if command -v nc &> /dev/null; then
if timeout $TIMEOUT nc -z "$AUDIT_SINK_HOST" "$AUDIT_SINK_PORT" 2>/dev/null; then
echo -e "${GREEN}✓ Audit sink is reachable on port $AUDIT_SINK_PORT${NC}"
else
echo -e "${RED}✗ Audit sink is NOT reachable on $AUDIT_SINK_HOST:$AUDIT_SINK_PORT${NC}"
echo "This is a HARD STOP for HIPAA deployments."
exit 1
fi
elif command -v redis-cli &> /dev/null; then
# Try to ping via redis-cli if available
if timeout $TIMEOUT redis-cli -h "$AUDIT_SINK_HOST" -p "$AUDIT_SINK_PORT" ping 2>/dev/null | grep -q "PONG"; then
echo -e "${GREEN}✓ Audit sink responded to Redis ping${NC}"
else
echo -e "${RED}✗ Audit sink did not respond to Redis ping${NC}"
echo "This is a HARD STOP for HIPAA deployments."
exit 1
fi
else
echo -e "${YELLOW}⚠ Neither nc nor redis-cli available - skipping reachability check${NC}"
echo "For production, ensure one of these tools is installed."
fi
# Check if audit sink is writable (append-only test)
echo ""
echo "Step 2: Checking write capability..."
# For a proper audit sink, we should be able to write but not modify
# This is typically implemented with Redis append-only file (AOF) persistence
# and restricted commands
if command -v docker &> /dev/null; then
# Check if the audit sink container is running
CONTAINER_NAME="ml-${ENV}-audit-sink"
if docker ps | grep -q "$CONTAINER_NAME"; then
echo -e "${GREEN}✓ Audit sink container '$CONTAINER_NAME' is running${NC}"
# Test write capability
TEST_KEY="audit_test_$(date +%s)"
TEST_VALUE="test_$(uuidgen 2>/dev/null || echo $RANDOM)"
if docker exec "$CONTAINER_NAME" redis-cli SET "$TEST_KEY" "$TEST_VALUE" EX 60 > /dev/null 2>&1; then
echo -e "${GREEN}✓ Audit sink accepts writes${NC}"
# Verify we can read it back
READ_VALUE=$(docker exec "$CONTAINER_NAME" redis-cli GET "$TEST_KEY" 2>/dev/null)
if [ "$READ_VALUE" = "$TEST_VALUE" ]; then
echo -e "${GREEN}✓ Audit sink read-after-write successful${NC}"
else
echo -e "${YELLOW}⚠ Audit sink read-after-write mismatch${NC}"
fi
# Clean up
docker exec "$CONTAINER_NAME" redis-cli DEL "$TEST_KEY" > /dev/null 2>&1 || true
else
echo -e "${RED}✗ Audit sink does not accept writes${NC}"
exit 1
fi
else
echo -e "${YELLOW}⚠ Audit sink container '$CONTAINER_NAME' not found${NC}"
echo "Container may not be running or may have a different name."
fi
else
echo -e "${YELLOW}⚠ Docker not available - skipping container check${NC}"
fi
# Final summary
echo ""
echo "==================================="
echo "Audit Sink Check Summary"
echo "==================================="
echo -e "${GREEN}✓ Audit sink is reachable and writable${NC}"
echo ""
echo "Deployment can proceed."
echo "Note: This check does NOT verify:"
echo " - Append-only configuration"
echo " - Log retention policies"
echo " - Chain integrity"
echo " - Tamper resistance"
echo ""
echo "These must be verified separately for full HIPAA compliance."
exit 0

View file

@ -1,222 +1,83 @@
#!/usr/bin/env bash
set -euo pipefail;
# Development smoke test for FetchML
#
# NOTE: If using Colima on macOS, ensure the repo directory is mounted:
# colima stop
# colima start --mount "/Users/jfraeys/Documents/dev/fetch_ml:w"
#
# Usage:
# ./scripts/dev/smoke-test.sh # Standard run
# BUILD_PROGRESS=plain ./scripts/dev/smoke-test.sh # Show full build logs
# KEEP_STACK=1 ./scripts/dev/smoke-test.sh # Keep containers after test
set -euo pipefail
repo_root="$(cd "$(dirname "${BASH_SOURCE[0]}")/../.." && pwd)"
export FETCHML_REPO_ROOT="$repo_root"
# Parse arguments
env="dev"
native_mode=false
# Use workspace-relative data directory (Colima-compatible)
# Avoid $HOME/.fetchml - Colima can't create directories through Docker volumes there
DEFAULT_DATA_DIR="$repo_root/data/smoke"
DATA_DIR="${FETCHML_DATA_DIR:-$DEFAULT_DATA_DIR}"
while [[ $# -gt 0 ]]; do
case "$1" in
--native)
native_mode=true
shift
;;
dev|prod)
env="$1"
shift
;;
--help|-h)
echo "Usage: $0 [dev|prod] [--native]"
echo ""
echo "Options:"
echo " dev|prod Environment to test (default: dev)"
echo " --native Also test native libraries (C++ integration)"
echo " --help Show this help"
exit 0
;;
*)
echo "Unknown option: $1" >&2
echo "Usage: $0 [dev|prod] [--native]" >&2
exit 2
;;
esac
done
echo "Using DATA_DIR: $DATA_DIR"
rm -rf "$DATA_DIR"
# Native library smoke test (merged from smoke-test-native.sh)
if [[ "$native_mode" == true ]]; then
echo "=== FetchML Native Libraries Smoke Test ==="
echo ""
# Create parent directory first with explicit permissions (for Colima compatibility)
mkdir -p "$(dirname "$DATA_DIR")"
chmod 755 "$(dirname "$DATA_DIR")"
cd "$repo_root"
# Create data directory structure
mkdir -p "$DATA_DIR"/{redis,minio,logs,experiments,active,workspaces,caddy/data,caddy/config,ssl,configs}
chmod -R 777 "$DATA_DIR"
# Build native libraries
echo "1. Building native libraries..."
if [[ -d native/build ]]; then
cd native/build
cmake .. -DCMAKE_BUILD_TYPE=Release -DENABLE_ASAN=OFF >/dev/null 2>&1 || true
make -j4 2>&1 | grep -E "(Built|Error|error)" || true
cd ../..
echo " Native libraries built"
else
echo " ⚠ native/build not found, skipping native build"
fi
echo ""
# Copy configs to DATA_DIR for mounting
cp -r "$repo_root/configs/"* "$DATA_DIR/configs/"
# Run C++ unit tests
echo "2. Running C++ smoke tests..."
local tests_run=0
for test_bin in ./native/build/test_*; do
if [[ -x "$test_bin" ]]; then
local test_name=$(basename "$test_bin")
echo " Running $test_name..."
"$test_bin" 2>/dev/null && echo "$test_name passed" || echo "$test_name skipped/failed"
((tests_run++))
fi
done
if [[ $tests_run -eq 0 ]]; then
echo " ⚠ No C++ tests found"
else
echo " Ran $tests_run C++ test(s)"
fi
echo ""
# Build arguments
BUILD_PROGRESS="${BUILD_PROGRESS:-auto}" # Set to 'plain' for full logs
echo "3. Building Go applications with native libs..."
go build -tags native_libs -o /dev/null ./cmd/api-server 2>&1 | grep -v "ignoring duplicate" || true
echo " api-server builds"
go build -tags native_libs -o /dev/null ./cmd/worker 2>&1 | grep -v "ignoring duplicate" || true 2>/dev/null || echo " (worker optional)"
echo ""
fi
compose_cmd=$(command -v docker-compose >/dev/null 2>&1 && echo "docker-compose" || echo "docker compose")
probe_https_health_openssl() {
host="$1"
port="$2"
path="$3"
req="GET ${path} HTTP/1.1\r\nHost: ${host}\r\nConnection: close\r\n\r\n"
resp=$(printf "%b" "$req" | openssl s_client -connect "127.0.0.1:${port}" -servername "${host}" -tls1_2 -quiet 2>/dev/null || true)
printf "%s" "$resp" | tr -d '\r' | head -n 1 | grep -Eq '^HTTP/1\.[01] 200'
}
compose_cmd="docker-compose";
if ! command -v docker-compose >/dev/null 2>&1; then
compose_cmd="docker compose";
fi
compose_files=()
compose_project_args=("--project-directory" "$repo_root")
api_base=""
prometheus_base=""
stack_name=""
api_wait_seconds=90
prometheus_wait_seconds=90
if [ "$env" = "dev" ]; then
# Use temp directory for smoke test data to avoid file sharing issues on macOS/Colima
SMOKE_TEST_DATA_DIR="${SMOKE_TEST_DATA_DIR:-$(mktemp -d /tmp/fetch_ml_smoke.XXXXXX)}"
echo "Using temp directory: $SMOKE_TEST_DATA_DIR"
mkdir -p \
"$SMOKE_TEST_DATA_DIR/redis" \
"$SMOKE_TEST_DATA_DIR/minio" \
"$SMOKE_TEST_DATA_DIR/prometheus" \
"$SMOKE_TEST_DATA_DIR/grafana" \
"$SMOKE_TEST_DATA_DIR/loki" \
"$SMOKE_TEST_DATA_DIR/logs" \
"$SMOKE_TEST_DATA_DIR/experiments" \
"$SMOKE_TEST_DATA_DIR/active" \
"$SMOKE_TEST_DATA_DIR/workspaces"
# Copy monitoring config to temp directory (required for promtail)
cp "$repo_root/monitoring/promtail-config.yml" "$SMOKE_TEST_DATA_DIR/"
# Export for docker-compose to use
export SMOKE_TEST_DATA_DIR
# Create env file for docker-compose (process substitution doesn't work)
env_file="$SMOKE_TEST_DATA_DIR/.env"
echo "SMOKE_TEST_DATA_DIR=$SMOKE_TEST_DATA_DIR" > "$env_file"
echo "FETCHML_REPO_ROOT=$repo_root" >> "$env_file"
# Update compose project args to include env file
compose_project_args=("--project-directory" "$repo_root" "--env-file" "$env_file")
stack_name="dev"
api_wait_seconds=180
prometheus_wait_seconds=180
compose_files=("-f" "$repo_root/deployments/docker-compose.dev.yml")
api_base="https://localhost:9101"
if ! curl -skf "$api_base/health" >/dev/null 2>&1; then
api_base="http://localhost:9101"
fi
prometheus_base="http://localhost:9090"
else
# Use temp directory for prod smoke test too
SMOKE_TEST_DATA_DIR="${SMOKE_TEST_DATA_DIR:-$(mktemp -d /tmp/fetch_ml_smoke_prod.XXXXXX)}"
echo "Using temp directory: $SMOKE_TEST_DATA_DIR"
mkdir -p \
"$SMOKE_TEST_DATA_DIR/caddy/data" \
"$SMOKE_TEST_DATA_DIR/caddy/config" \
"$SMOKE_TEST_DATA_DIR/redis" \
"$SMOKE_TEST_DATA_DIR/logs" \
"$SMOKE_TEST_DATA_DIR/experiments" \
"$SMOKE_TEST_DATA_DIR/active"
# Copy monitoring config to temp directory (required for promtail)
cp "$repo_root/monitoring/promtail-config.yml" "$SMOKE_TEST_DATA_DIR/"
# Export for docker-compose to use
export SMOKE_TEST_DATA_DIR
# Create env file for docker-compose (process substitution doesn't work)
env_file="$SMOKE_TEST_DATA_DIR/.env"
echo "SMOKE_TEST_DATA_DIR=$SMOKE_TEST_DATA_DIR" > "$env_file"
echo "FETCHML_REPO_ROOT=$repo_root" >> "$env_file"
# Update compose project args to include env file
compose_project_args=("--project-directory" "$repo_root" "--env-file" "$env_file")
stack_name="prod"
compose_files=("-f" "$repo_root/deployments/docker-compose.prod.smoke.yml")
api_base="https://localhost:8443"
export FETCHML_DOMAIN=localhost
export CADDY_EMAIL=smoke@example.invalid
# Determine build flags
build_flags=""
if [[ "$BUILD_PROGRESS" == "plain" ]]; then
# For docker compose v2+ with buildkit
export BUILDKIT_PROGRESS=plain
build_flags="--progress=plain"
fi
cleanup() {
status=$?;
if [ "$status" -ne 0 ]; then
$compose_cmd "${compose_project_args[@]}" "${compose_files[@]}" logs --no-color || true;
status=$?
if [[ $status -ne 0 ]]; then
$compose_cmd -f "$repo_root/deployments/docker-compose.dev.yml" logs --no-color 2>/dev/null || true
fi
if [ "${KEEP_STACK:-0}" != "1" ]; then
$compose_cmd "${compose_project_args[@]}" "${compose_files[@]}" down -v >/dev/null 2>&1 || true;
if [[ "${KEEP_STACK:-0}" != "1" ]]; then
$compose_cmd -f "$repo_root/deployments/docker-compose.dev.yml" down -v >/dev/null 2>&1 || true
rm -rf "$DATA_DIR"
fi
exit "$status";
exit $status
}
trap cleanup EXIT;
echo "Starting $stack_name stack for smoke test...";
trap cleanup EXIT
$compose_cmd "${compose_project_args[@]}" "${compose_files[@]}" up -d --build >/dev/null;
echo "Waiting for API to become healthy...";
echo "Starting dev stack for smoke test..."
export DATA_DIR="$DATA_DIR"
deadline=$(($(date +%s) + $api_wait_seconds));
while true; do
if [ "$env" = "dev" ]; then
if curl -skf "$api_base/health" >/dev/null 2>&1; then break; fi;
else
if probe_https_health_openssl "localhost" "8443" "/health"; then break; fi;
# Build first with progress option if specified, then up
if [[ "$BUILD_PROGRESS" == "plain" ]]; then
$compose_cmd -f "$repo_root/deployments/docker-compose.dev.yml" --project-directory "$repo_root" build --progress=plain
fi
$compose_cmd -f "$repo_root/deployments/docker-compose.dev.yml" --project-directory "$repo_root" up -d --build
echo "Waiting for API to become healthy..."
deadline=$(( $(date +%s) + 180 ))
while ! curl -sf http://localhost:9101/health >/dev/null 2>&1; do
if [[ $(date +%s) -ge $deadline ]]; then
echo "Timed out waiting for API"
exit 1
fi
if [ $(date +%s) -ge $deadline ]; then echo "Timed out waiting for $api_base/health"; exit 1; fi;
sleep 2;
done;
sleep 2
done
if [ "$env" = "dev" ]; then
echo "Checking metrics endpoint...";
curl -skf "$api_base/metrics" >/dev/null;
echo "Waiting for Prometheus target api-server to be up...";
deadline=$(($(date +%s) + $prometheus_wait_seconds));
query_url="$prometheus_base/api/v1/query?query=up%7Bjob%3D%22api-server%22%7D";
while true; do
resp=$(curl -sf "$query_url" || true);
resp_compact=$(printf "%s" "$resp" | tr -d '\n' | tr -d '\r');
if echo "$resp_compact" | grep -Fq '"instance":"api-server:9101"' && echo "$resp_compact" | grep -Fq ',"1"]'; then break; fi;
if [ $(date +%s) -ge $deadline ]; then echo "Timed out waiting for Prometheus api-server target to be up"; echo "$resp"; exit 1; fi;
sleep 2;
done;
fi
echo "API is healthy"

View file

@ -35,10 +35,12 @@ print_error() {
cleanup_docker() {
print_header "Docker Compose Cleanup"
local compose_cmd=$(command -v docker-compose >/dev/null 2>&1 && echo "docker-compose" || echo "docker compose")
# Stop all project-related containers
docker-compose -f deployments/docker-compose.dev.yml down --volumes --remove-orphans 2>/dev/null || true
docker-compose -f deployments/docker-compose.local.yml down --volumes --remove-orphans 2>/dev/null || true
docker-compose -f tests/e2e/docker-compose.logs-debug.yml down --volumes --remove-orphans 2>/dev/null || true
$compose_cmd -f deployments/docker-compose.dev.yml down --volumes --remove-orphans 2>/dev/null || true
$compose_cmd -f deployments/docker-compose.local.yml down --volumes --remove-orphans 2>/dev/null || true
$compose_cmd -f tests/e2e/docker-compose.logs-debug.yml down --volumes --remove-orphans 2>/dev/null || true
# Remove project-specific images (keep base images)
docker images --filter "reference=fetchml*" --format "{{.ID}}" | xargs -r docker rmi -f 2>/dev/null || true

View file

@ -13,10 +13,12 @@ if [ ! -f "native/build/libqueue_index.so" ] && [ ! -f "native/build/libqueue_in
make native-build
fi
compose_cmd=$(command -v docker-compose >/dev/null 2>&1 && echo "docker-compose" || echo "docker compose")
# Start Redis via docker-compose
echo "Starting Redis..."
cd deployments
docker-compose -f docker-compose.dev.yml up -d redis
$compose_cmd -f docker-compose.dev.yml up -d redis
cd ..
# Wait for Redis to be ready
@ -47,7 +49,7 @@ fi
echo ""
echo "Stopping Redis..."
cd deployments
docker-compose -f docker-compose.dev.yml stop redis
$compose_cmd -f docker-compose.dev.yml stop redis
cd ..
exit $TEST_EXIT

View file

@ -5,9 +5,11 @@ set -e
echo "Starting Full Production Test Environment with Podman and SQLite..."
compose_cmd=$(command -v docker-compose >/dev/null 2>&1 && echo "docker-compose" || echo "docker compose")
# Clean up any existing containers
echo "Cleaning up existing containers..."
docker-compose -f deployments/docker-compose.prod.yml down -v
$compose_cmd -f deployments/docker-compose.prod.yml down -v
# Create necessary directories
echo "Creating directories..."
@ -15,7 +17,7 @@ mkdir -p data logs
# Build and start services
echo "Building and starting services..."
docker-compose -f deployments/docker-compose.prod.yml up --build -d
$compose_cmd -f deployments/docker-compose.prod.yml up --build -d
# Wait for services to be healthy
echo "Waiting for services to be healthy..."
@ -23,7 +25,7 @@ sleep 15
# Check service health
echo "Checking service health..."
docker-compose -f deployments/docker-compose.prod.yml ps
$compose_cmd -f deployments/docker-compose.prod.yml ps
# Test API server
echo "Testing API server..."
@ -59,8 +61,7 @@ echo " ./cli/zig-out/bin/ml queue prod-test-job"
echo " ./cli/zig-out/bin/ml status"
echo ""
echo "To view logs:"
echo " docker-compose -f deployments/docker-compose.prod.yml logs -f worker"
echo " docker-compose -f deployments/docker-compose.prod.yml down"
echo " $compose_cmd -f deployments/docker-compose.prod.yml logs -f worker"
echo ""
echo "To stop:"
echo " docker-compose -f deployments/docker-compose.prod.yml down"
echo " $compose_cmd -f deployments/docker-compose.prod.yml down"

View file

@ -25,22 +25,24 @@ if [[ ! -f "$SSH_KEY" ]]; then
fi
# Check if docker-compose services are running
echo "=== Checking Docker Compose Services ==="
cd "$REPO_ROOT/deployments"
compose_cmd=$(command -v docker-compose >/dev/null 2>&1 && echo "docker-compose" || echo "docker compose")
if docker-compose -f docker-compose.prod.smoke.yml ps | grep -q "ml-smoke-caddy"; then
echo "=== Checking Docker Compose Services ==="
cd "$REPO_ROOT"
if $compose_cmd -f deployments/docker-compose.prod.smoke.yml ps | grep -q "ml-smoke-caddy"; then
echo "Caddy container running"
else
echo "✗ Caddy container not running"
echo "Start services: docker-compose -f docker-compose.prod.smoke.yml up -d"
echo "Start services: $compose_cmd -f deployments/docker-compose.prod.smoke.yml up -d"
exit 1
fi
if docker-compose -f docker-compose.prod.smoke.yml ps | grep -q "ml-ssh-test"; then
if $compose_cmd -f deployments/docker-compose.prod.smoke.yml ps | grep -q "ml-ssh-test"; then
echo "SSH test container running"
else
echo "✗ SSH test container not running"
echo "Start services: docker-compose -f docker-compose.prod.smoke.yml up -d"
echo "Start services: $compose_cmd -f deployments/docker-compose.prod.smoke.yml up -d"
exit 1
fi

View file

@ -86,26 +86,26 @@ func ParseGoBenchOutput(r io.Reader) ([]BenchmarkResult, error) {
// BenchmarkResult represents a single benchmark result
type BenchmarkResult struct {
Name string `json:"name"`
Value float64 `json:"value"`
Unit string `json:"unit"`
Timestamp time.Time `json:"timestamp"`
Name string `json:"name"`
Unit string `json:"unit"`
Value float64 `json:"value"`
}
// RegressionReport contains regression analysis results
type RegressionReport struct {
Summary string `json:"summary"`
Regressions []Regression `json:"regressions"`
Improvements []Improvement `json:"improvements"`
Summary string `json:"summary"`
}
// Regression represents a performance regression
type Regression struct {
Benchmark string `json:"benchmark"`
Severity string `json:"severity"`
CurrentValue float64 `json:"current_value"`
BaselineValue float64 `json:"baseline_value"`
PercentChange float64 `json:"percent_change"`
Severity string `json:"severity"`
}
// Improvement represents a performance improvement

View file

@ -15,13 +15,13 @@ import (
// Profiler provides performance profiling capabilities
type Profiler struct {
startTime time.Time
cpuProfile string
memProfile string
traceProfile string
blockProfile string
mutexProfile string
enabled bool
startTime time.Time
}
// ProfileConfig defines profiling configuration
@ -151,12 +151,12 @@ func (p *Profiler) Stop() error {
// ProfileAnalysis contains analysis results from profiling data
type ProfileAnalysis struct {
GCStats GCStats `json:"gc_stats"`
TopFunctions []FunctionInfo `json:"top_functions"`
Recommendations []string `json:"recommendations"`
MemoryUsage MemoryInfo `json:"memory_usage"`
GoroutineCount int `json:"goroutine_count"`
HeapSize uint64 `json:"heap_size"`
GCStats GCStats `json:"gc_stats"`
Recommendations []string `json:"recommendations"`
}
// FunctionInfo represents profiling information for a function
@ -179,10 +179,10 @@ type MemoryInfo struct {
// GCStats contains garbage collection statistics
type GCStats struct {
NumGC uint32 `json:"num_gc"`
Pause []time.Duration `json:"pauses_ns"`
GCCPUFraction float64 `json:"gc_cpu_fraction"`
PauseTotal time.Duration `json:"pause_total_ns"`
Pause []time.Duration `json:"pauses_ns"`
NumGC uint32 `json:"num_gc"`
}
// AnalyzeProfiles analyzes generated profile files and returns insights